stdlib_io_npy Module

  1. stdlib_io_npy.fypp
  2. stdlib_io_npy

Description of the npy format taken from https://numpy.org/doc/stable/reference/generated/numpy.lib.format.html

Format Version 1.0

The first 6 bytes are a magic string: exactly \x93NUMPY.

The next 1 byte is an unsigned byte: the major version number of the file format, e.g. \x01.

The next 1 byte is an unsigned byte: the minor version number of the file format, e.g. \x00. Note: the version of the file format is not tied to the version of the numpy package.

The next 2 bytes form a little-endian unsigned short int: the length of the header data HEADER_LEN.

The next HEADER_LEN bytes form the header data describing the array’s format. It is an ASCII string which contains a Python literal expression of a dictionary. It is terminated by a newline (\n) and padded with spaces (\x20) to make the total of len(magic string) + 2 + len(length) + HEADER_LEN be evenly divisible by 64 for alignment purposes.

The dictionary contains three keys:

  • “descr”: dtype.descr An object that can be passed as an argument to the numpy.dtype constructor to create the array’s dtype.

  • “fortran_order”: bool Whether the array data is Fortran-contiguous or not. Since Fortran-contiguous arrays are a common form of non-C-contiguity, we allow them to be written directly to disk for efficiency.

  • “shape”: tuple of int The shape of the array.

For repeatability and readability, the dictionary keys are sorted in alphabetic order. This is for convenience only. A writer SHOULD implement this if possible. A reader MUST NOT depend on this.

Following the header comes the array data. If the dtype contains Python objects (i.e. dtype.hasobject is True), then the data is a Python pickle of the array. Otherwise the data is the contiguous (either C- or Fortran-, depending on fortran_order) bytes of the array. Consumers can figure out the number of bytes by multiplying the number of elements given by the shape (noting that shape=() means there is 1 element) by dtype.itemsize.

Format Version 2.0

The version 1.0 format only allowed the array header to have a total size of 65535 bytes. This can be exceeded by structured arrays with a large number of columns. The version 2.0 format extends the header size to 4 GiB. numpy.save will automatically save in 2.0 format if the data requires it, else it will always use the more compatible 1.0 format.

The description of the fourth element of the header therefore has become: “The next 4 bytes form a little-endian unsigned int: the length of the header data HEADER_LEN.”

Format Version 3.0

This version replaces the ASCII string (which in practice was latin1) with a utf8-encoded string, so supports structured types with any unicode field names.


Uses

  • module~~stdlib_io_npy~~UsesGraph module~stdlib_io_npy stdlib_io_npy module~stdlib_kinds stdlib_kinds module~stdlib_io_npy->module~stdlib_kinds iso_fortran_env iso_fortran_env module~stdlib_kinds->iso_fortran_env iso_c_binding iso_c_binding module~stdlib_kinds->iso_c_binding

Used by

  • module~~stdlib_io_npy~~UsedByGraph module~stdlib_io_npy stdlib_io_npy module~stdlib_io_npy_save stdlib_io_npy_save module~stdlib_io_npy_save->module~stdlib_io_npy module~stdlib_io_npy_load stdlib_io_npy_load module~stdlib_io_npy_load->module~stdlib_io_npy

Contents

Interfaces


Interfaces

public interface load_npy

Load multidimensional array in npy format (Specification)

  • private module subroutine load_npy_cdp_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=dp), intent(out), allocatable:: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_cdp_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=dp), intent(out), allocatable:: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_cdp_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=dp), intent(out), allocatable:: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_csp_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=sp), intent(out), allocatable:: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_csp_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=sp), intent(out), allocatable:: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_csp_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=sp), intent(out), allocatable:: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint16_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int16), intent(out), allocatable:: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint16_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int16), intent(out), allocatable:: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint16_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int16), intent(out), allocatable:: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint32_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int32), intent(out), allocatable:: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint32_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int32), intent(out), allocatable:: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint32_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int32), intent(out), allocatable:: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint64_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int64), intent(out), allocatable:: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint64_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int64), intent(out), allocatable:: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint64_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int64), intent(out), allocatable:: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint8_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int8), intent(out), allocatable:: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint8_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int8), intent(out), allocatable:: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_iint8_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int8), intent(out), allocatable:: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_rdp_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=dp), intent(out), allocatable:: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_rdp_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=dp), intent(out), allocatable:: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_rdp_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=dp), intent(out), allocatable:: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_rsp_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=sp), intent(out), allocatable:: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_rsp_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=sp), intent(out), allocatable:: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine load_npy_rsp_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=sp), intent(out), allocatable:: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

public interface save_npy

Save multidimensional array in npy format (Specification)

  • private module subroutine save_npy_cdp_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=dp), intent(in) :: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_cdp_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=dp), intent(in) :: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_cdp_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=dp), intent(in) :: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_csp_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=sp), intent(in) :: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_csp_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=sp), intent(in) :: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_csp_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    complex(kind=sp), intent(in) :: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint16_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int16), intent(in) :: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint16_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int16), intent(in) :: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint16_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int16), intent(in) :: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint32_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int32), intent(in) :: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint32_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int32), intent(in) :: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint32_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int32), intent(in) :: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint64_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int64), intent(in) :: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint64_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int64), intent(in) :: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint64_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int64), intent(in) :: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint8_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int8), intent(in) :: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint8_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int8), intent(in) :: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_iint8_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    integer(kind=int8), intent(in) :: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_rdp_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=dp), intent(in) :: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_rdp_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=dp), intent(in) :: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_rdp_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=dp), intent(in) :: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_rsp_1(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=sp), intent(in) :: array(:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_rsp_2(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=sp), intent(in) :: array(:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg

  • private module subroutine save_npy_rsp_3(filename, array, iostat, iomsg)

    Arguments

    TypeIntentOptionalAttributesName
    character(len=*), intent(in) :: filename
    real(kind=sp), intent(in) :: array(:,:,:)
    integer, intent(out), optional :: iostat
    character(len=:), intent(out), optional allocatable:: iomsg